BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033F11LP1|AL429783
(919 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1806 1508 0.0
>3x_Contig1806
Length = 53694
Score = 1508 bits (728), Expect = 0.0
Identities = 844/920 (91%), Gaps = 2/920 (0%)
Strand = Plus / Plus
Query: 1 aatcaggagaccagcagaggcaattgatacattccttatgtgttgtagtcaacttcatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3978 aatcaggagaccagcagaggcaattgatacattccttatgtgttgtagtcaacttcatca 4037
Query: 61 ttttcgatgatgaaatctcatatacyagcmtgtcagtsttctgacatattgcsatcmatt 120
||||||||||||||||||||||||| ||| ||||||| |||||||||||||| ||| |||
Sbjct: 4038 ttttcgatgatgaaatctcatatactagcatgtcagtgttctgacatattgcgatcaatt 4097
Query: 121 caccatctggtgagayctgacaagmmgtactgattttccctgatgcmggamgtacctgty 180
||||||||||||||| |||||||| ||||||||||| |||||||| ||| ||||||||
Sbjct: 4098 caccatctggtgagatctgacaagaagtactgatttttcctgatgcaggaagtacctgtt 4157
Query: 181 tatcamattgamgcmtccytagggttagcgtgagaycagacaccgagtctaamtcacaca 240
||||| ||||| || ||| |||||||||||||||| |||||||||||||||| |||||||
Sbjct: 4158 tatcaaattgaagcatccttagggttagcgtgagatcagacaccgagtctaaatcacaca 4217
Query: 241 tgamggcacatctcttcaagamttcttagtatttcmgtatttyycmmtsagaatttgamt 300
||| ||||||||||||||||| |||||||||||| |||||| | ||||||||| |
Sbjct: 4218 tgaaggcacatctcttcaagaattcttagtattttagtatttttaaatgagaatttgaat 4277
Query: 301 tggcgatttcmgttagatgaggaamatgtgtcagcsggaacmatacaggatgacatagcc 360
|||||||||| ||||||||||||| |||||||||| ||||| ||||||||||| ||||||
Sbjct: 4278 tggcgatttcagttagatgaggaaaatgtgtcagcgggaacaatacaggatgaaatagcc 4337
Query: 361 tcaataggccttcyacggmmttsacaatacgcyagttgatgggcattgaacctstmagac 420
||||||||||||| |||| || ||||||||| |||||||||||||||||||| | |||
Sbjct: 4338 tcaataggccttctacggaattgacaatacgctagttgatgggcattgaacctgtaagat 4397
Query: 421 aaccctagtmattcmcmgtgctaggctacagtgatgtattacmcmtggmaagmmcaamac 480
||||||||| ||| | |||||||||||||||||||||||| | ||| ||| ||| ||
Sbjct: 4398 aaccctagtaatttacagtgctaggctacagtgatgtattaaacatggaaagaacaaaac 4457
Query: 481 ccgcacaccacacactaaacacactcattctctttctattgccatamcaymmgtcaacas 540
|||||||||||||||||||||||||||||||||||||||||||||| | || || |
Sbjct: 4458 ccgcacaccacacactaaacacactcattctctttctattgccataaaataagttaaaag 4517
Query: 541 tggaaatcattccamatmgtttaagcmtttatggacatacaaaccacagggaaatcactt 600
|||||||||||||| || |||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 4518 tggaaatcattccaaatagtttaagcatttatggacatacaaaccacagggaaataactt 4577
Query: 601 tmtcacasacagtagagtmattcatagggtctaacacactgaatacmgtagacagtaact 660
| | ||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 4578 tataacagacagtagagtaattcatagggtctaacacactgaatacagtagacagtaact 4637
Query: 661 cactcccaggtaaacataatactgtcatmmg-accatatccaagaatgccaatgaatatc 719
| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 4638 aaatcccaggtaaacataatactgtcataagaaccatatccaagaatgccaatgaatatc 4697
Query: 720 gttccaagtccagatttcaagtctgctgttgccaccgataagggttgcgagcaccaatcg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4698 gttccaagtccagatttcaagtctgctgttgccaccgataagggttgcgagcaccaatcg 4757
Query: 780 aatgcagtagcaagtttaccagatgtattccgtgaacaagtcggtgcccgccctctgaac 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4758 aatgcagtagcaagtttaccagatgtattccgtgaacaagtcggtgcccgccctctgaac 4817
Query: 840 actcaacttaatgacagacatccattagagtcgcgtgtacgcaactggggacgagaccca 899
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 4818 actcaacttaatgacagacatccattagagtcgcgtgtacgcaact-gggacgagaccca 4876
Query: 900 gcacaaaaggcaattggaac 919
||||||||||||||||||||
Sbjct: 4877 gcacaaaaggcaattggaac 4896
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.44 0.720 1.36
Gapped
Lambda K H
1.44 0.720 1.36
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2989
Number of Sequences: 1807
Number of extensions: 2989
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 1
length of query: 919
length of database: 10,358,551
effective HSP length: 16
effective length of query: 903
effective length of database: 10,329,639
effective search space: 9327664017
effective search space used: 9327664017
T: 0
A: 40
X1: 5 (10.4 bits)
X2: 14 (29.0 bits)
S1: 11 (23.3 bits)
S2: 48 (99.9 bits)